BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A12LP1|AL426310
(738 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1290 1445 0.0
>3x_Contig1290
Length = 6501
Score = 1445 bits (727), Expect = 0.0
Identities = 733/737 (99%)
Strand = Plus / Minus
Query: 1 tttatctgacagtgggtcatagtcggttgaadaaggaggagttggaagaatttgagagaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4812 tttatctgacagtgggtcatagtcggttgaagaaggaggagttggaagaatttgagagaa 4753
Query: 61 tttcatttcagcgaacgaatacatgacaaatgctttggccgcaagcgattccactgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4752 tttcatttcagcgaacgaatacatgacaaatgctttggccgcaagcgattccactgcagg 4693
Query: 121 agttatgttggaatccaacatttgttcgctgaaaggatttagtttatgatcagccctcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4692 agttatgttggaatccaacatttgttcgctgaaaggatttagtttatgatcagccctcaa 4633
Query: 181 tactgcattttccgttagctcctgaaatatctgaggattcagtagtgtttgttgaggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4632 tactgcattttccgttagctcctgaaatatctgaggattcagtagtgtttgttgaggtgg 4573
Query: 241 cgaagaagtagcctttgtattatgttgatatccgaaaagccttacagaagctaaccctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4572 cgaagaagtagcctttgtattatgttgatatccgaaaagccttacagaagctaaccctag 4513
Query: 301 tgccttcgataacgcattcgacgggcttaatgacgatatcgaaagccttctctccactaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4512 tgccttcgataacgcattcgacgggcttaatgacgatatcgaaagccttctctccactaa 4453
Query: 361 agaggctcttcttcctcctgatgcatcgctagaagaagacgttctgtatctcaagggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4452 agaggctcttcttcctcctgatgcatcgctagaagaagacgttctgtatctcaagggttt 4393
Query: 421 tataacttgtgccccttggttgtttgttatgggtccattattagcaaaatcatcagccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4392 tataacttgtgccccttggttgtttgttatgggtccattattagcaaaatcatcagccaa 4333
Query: 481 araatttacttcgacagttttcttctccacaacaacatactccttctccaaaatcaaatc 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 agaatttacttcgacagttttcttctccacaacaacatactccttctccaaaatcaaatc 4273
Query: 541 attgtaagagctctttagcctcttctgacttgcagatttgtagctttgttctgggttttg 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4272 attgtaagagctctttagcctcttctgacttgcagattggtagctttgttctgggttttg 4213
Query: 601 agagttatcttctgggtggatctgttgatgtggtggatggtttgttgcgagcctctcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4212 agagttatcttctgggtggatctgttgatgtggtggatggtttgttgcgagcctctcttt 4153
Query: 661 acctgaggttcgcctaacgccagtttgtacactagtgttctcgtcagtttkagttggtgg 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4152 acctgaggttcgcctaacgccagtttgtacactagtgttctcgtcagtttgagttggtgg 4093
Query: 721 tatatgtgcagattcct 737
|||||||||||||||||
Sbjct: 4092 tatatgtgcagattcct 4076
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4813
Number of Sequences: 1807
Number of extensions: 4813
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 738
length of database: 10,358,551
effective HSP length: 16
effective length of query: 722
effective length of database: 10,329,639
effective search space: 7457999358
effective search space used: 7457999358
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)